General Structure Information
| PDB ID | 3kn1 |
| HGNC Gene Label(s) | GOLPH3 |
| Structure Name | crystal structure of golgi phosphoprotein 3 n-term truncation variant |
| Resolution | 2.9Å |
| Reference | AUTH C.S.WOOD,K.R.SCHMITZ,N.J.BESSMAN,T.G.SETTY,AUTH 2 K.M.FERGUSON,C.G.BURDTITL PTDINS4P RECOGNITION BY VPS74/GOLPH3 LINKS PTDINSTITL 2 4-KINASE SIGNALING TO RETROGRADE GOLGI TRAFFICKING.REF J.CELL BIOL. V. 187 967 2009REFN ISSN 0021-9525PMID 20026658DOI 10.1083/JCB.200909063 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 234 |
| Number Of SNVs | 43 |
| Number Of Permutations | 27270 |
| Optimal Distance Threshold | 21.0 |
| K Statistic | 0.454 |
| p-value | 0.503 |
COSMIC
| Number Of Residues | 234 |
| Number Of SNVs | 3 |
| Number Of Permutations | 128 |
| Optimal Distance Threshold | 9.0 |
| K Statistic | 0.333 |
| p-value | 0.427 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 43 |
| Number Of COSMIC SNVs | 3 |
| Optimal Distance Threshold | 9.0 |
| K Statistic | 0.282 |
| p-value | 1.0 |