General Structure Information
| PDB ID | 4ijd |
| HGNC Gene Label(s) | PRDM9 |
| Structure Name | crystal structure of methyltransferase domain of human pr domain- containing protein 9 |
| Resolution | 2.15Å |
| Reference | AUTH L.DOMBROVSKI,A.DONG,Y.LI,W.TEMPEL,C.BOUNTRA,C.H.ARROWSMITH,AUTH 2 A.M.EDWARDS,P.J.BROWN,H.WU,AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC)TITL CRYSTAL STRUCTURE OF METHYLTRANSFERASE DOMAIN OF HUMAN PRTITL 2 DOMAIN-CONTAINING PROTEIN 9REF TO BE PUBLISHEDREFN |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 212 |
| Number Of SNVs | 56 |
| Number Of Permutations | 8564 |
| Optimal Distance Threshold | 10.0 |
| K Statistic | 0.064 |
| p-value | 0.231 |
COSMIC
| Number Of Residues | 212 |
| Number Of SNVs | 10 |
| Number Of Permutations | 1740 |
| Optimal Distance Threshold | 8.0 |
| K Statistic | 0.089 |
| p-value | 0.507 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 56 |
| Number Of COSMIC SNVs | 9 |
| Optimal Distance Threshold | 7.0 |
| K Statistic | 0.025 |
| p-value | 0.901 |