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2CRY.A | KIRREL3.

2CRY.A | KIRREL3

General Structure Information

PDB ID 2cry
HGNC Gene Label(s) KIRREL3
Structure Name solution structure of the fifth ig-like domain of human kin of irre like 3
Resolution -1.0Å
Reference AUTH C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMATITL SOLUTION STRUCTURE OF THE FIFTH IG-LIKE DOMAIN OFTITL 2 HUMAN KIN OF IRRE LIKE 3REF TO BE PUBLISHEDREFN

Variant Set Distributions

ExAC Variants

Number Of Residues 109
Number Of SNVs 28
Number Of Permutations 13301
Optimal Distance Threshold 7.0
K Statistic 0.071
p-value 0.96
COSMIC

Number Of Residues 109
Number Of SNVs 3
Number Of Permutations 230
Optimal Distance Threshold 27.0
K Statistic 0.333
p-value 0.255

Ripley’s K Analysis Plots

ExACCOSMIC

Variant Set Comparisons

Cosmic vs. ExAC

Number Of ExAC SNVs 28
Number Of COSMIC SNVs 3
Optimal Distance Threshold 17.0
K Statistic -0.439
p-value 0.23

Pathogenic Proximity Analysis

COSMIC PathProx Analysis

Mapped Variants

[+] ExAC Missense Variants

Position Variant AA Change PDB Chain Position Structure Coordinates
11:126314880 COSM924708
COSM1152280
COSM1152281
V>I A:11 (9.10, 22.21, 0.81)
11:126310417 T>N A:22 (-5.58, 1.45, -4.49)
11:126310415 Q>K A:23 (-6.33, -1.38, -8.10)
11:126310408 A>V A:25 (-7.82, -6.19, -7.48)
11:126310373 I>V A:37 (5.67, 8.41, -0.06)
11:126310363 T>M A:40 (11.15, 16.59, 0.22)
11:126310360 P>L A:41 (14.26, 15.04, 2.74)
11:126310358 P>S A:42 (13.56, 11.02, 0.73)
11:126306883 V>I A:54 (5.46, -5.48, 9.63)
11:126306858 rs369617080 R>H A:62 (1.39, -15.76, -1.48)
11:126306852 rs377164637 T>M A:64 (6.74, -7.85, -3.60)
11:126306849 V>A A:65 (7.69, -3.99, -0.24)
11:126306841 I>V A:68 (10.14, 3.79, -6.73)
11:126306826 G>C A:73 (9.60, 12.34, -3.96)
11:126306805 I>V A:80 (-0.72, -8.75, -3.48)
11:126306801 rs551182196 S>N A:81 (1.90, -12.92, -5.99)
11:126306797 N>K A:82 (-1.19, -15.28, -5.55)
11:126306795 I>T A:83 (-4.90, -10.32, -4.18)
11:126306793 rs550464999 V>M A:84 (-6.74, -13.87, -1.36)
11:126306789 R>Q A:85 (-13.24, -13.73, -1.81)
11:126306790 rs531558096 R>W A:85 (-13.24, -13.73, -1.81)
11:126306786 A>V A:86 (-8.48, -11.84, 2.60)
11:126306774 rs530293609 T>S A:90 (-6.46, -7.05, 5.33)
11:126306775 T>A A:90 (-6.46, -7.05, 5.33)
11:126306736 rs372347950 D>N A:103 (3.79, 9.92, 8.65)
11:126306726 I>T A:106 (-5.66, 4.02, 7.17)
11:126306720 rs530797370 R>Q A:108 (-10.39, 0.75, 4.04)
11:126306721 R>W A:108 (-10.39, 0.75, 4.04)
11:126306714 K>R A:110 (-13.09, 0.12, -1.90)
11:126305195 COSM924705
COSM1585578
COSM1585579
S>L A:114 (-16.13, 0.77, -7.67)
11:126305190 M>V A:116 (-21.57, -2.55, -10.51)

[+] COSMIC Missense Variants

Position Variant AA Change PDB Chain Position Structure Coordinates
11:126314880 COSM1152280 V>I A:11 (9.10, 22.21, 0.81)
11:126310386 COSM1160980 Q>H A:32 (0.81, -2.81, -7.91)
11:126305195 COSM1585578 S>L A:114 (-16.13, 0.77, -7.67)
Related Entries
2WTK|STRADA,CAB39,STK11
3F5N|SERPINI1
2WTK|STRADA,CAB39,STK11

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