General Structure Information
| PDB ID | 2xio |
| HGNC Gene Label(s) | TATDN1 |
| Structure Name | structure of putative deoxyribonuclease tatdn1 isoform a |
| Resolution | 1.19Å |
| Reference | AUTH J.R.C.MUNIZ,R.COCKING,S.PURANIK,T.KROJER,J.RAYNOR,M.VOLLMAR,AUTH 2 F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,AUTH 3 W.W.YUE,K.L.KAVANAGH,U.OPPERMANNTITL STRUCTURE OF PUTATIVE DEOXYRIBONUCLEASE TATDN1 ISOFORM AREF TO BE PUBLISHEDREFN |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 291 |
| Number Of SNVs | 73 |
| Number Of Permutations | 7512 |
| Optimal Distance Threshold | 6.0 |
| K Statistic | 0.02 |
| p-value | 0.992 |
Mapped Variants
[+] ExAC Missense Variants
| Position | Variant | AA Change | PDB Chain Position | Structure Coordinates |
|---|---|---|---|---|
| 8:125551274 | rs112007008 | K>R | A:5 | (36.95, 15.29, 85.82) |
| 8:125535216 | M>T | A:17 | (14.70, 8.95, 99.51) | |
| 8:125535217 | M>V | A:17 | (14.70, 8.95, 99.51) | |
| 8:125535197 | R>S | A:23 | (8.05, 8.53, 107.04) | |
| 8:125535186 | K>M | A:27 | (10.20, 0.90, 101.18) | |
| 8:125535183 | COSM357097 | H>L | A:28 | (13.83, 0.88, 98.97) |
| 8:125535180 | Q>R | A:29 | (17.37, -2.90, 99.49) | |
| 8:125534429 | D>V | A:34 | (24.29, 0.64, 94.81) | |
| 8:125534427 | V>I | A:35 | (23.73, 5.61, 94.55) | |
| 8:125534417 | R>K | A:38 | (24.42, 4.04, 90.21) | |
| 8:125534414 | A>G | A:39 | (28.57, 8.18, 90.43) | |
| 8:125534409 | rs528139673 | E>K | A:41 | (31.25, 4.17, 86.33) |
| 8:125531114 | I>M | A:49 | (27.48, 16.18, 101.94) | |
| 8:125531106 | rs149193849 | G>E | A:52 | (21.43, 23.50, 107.18) |
| 8:125531065 | rs201843631 | T>A | A:66 | (32.19, 7.14, 105.36) |
| 8:125531061 | rs146176613 | N>S | A:67 | (34.21, 8.04, 101.34) |
| 8:125531062 | rs139428852 | N>D | A:67 | (34.21, 8.04, 101.34) |
| 8:125528269 | M>V | A:69 | (34.86, 10.33, 97.44) | |
| 8:125528257 | T>A | A:73 | (28.61, 22.09, 104.44) | |
| 8:125528242 | P>S | A:78 | (17.42, 30.39, 105.00) | |
| 8:125528232 | C>Y | A:81 | (17.60, 31.07, 110.85) | |
| 8:125528208 | P>R | A:89 | (22.05, 33.79, 118.99) | |
| 8:125528184 | L>P | A:97 | (32.99, 28.38, 114.55) | |
| 8:125528179 | COSM1664477 | L>I | A:99 | (31.32, 21.61, 113.36) |
| 8:125528165 | N>K | A:103 | (36.03, 19.03, 111.33) | |
| 8:125528166 | N>S | A:103 | (36.03, 19.03, 111.33) | |
| 8:125528161 | rs201105584 | G>R | A:105 | (39.04, 18.21, 105.88) |
| 8:125528148 | A>V | A:109 | (31.97, 25.20, 103.37) | |
| 8:125528145 | I>T | A:110 | (30.45, 28.37, 105.39) | |
| 8:125528146 | I>V | A:110 | (30.45, 28.37, 105.39) | |
| 8:125528137 | rs376395587 | C>R | A:113 | (23.82, 30.44, 103.40) |
| 8:125528134 | G>R | A:114 | (20.87, 32.96, 102.74) | |
| 8:125528131 | L>V | A:115 | (18.15, 35.02, 101.35) | |
| 8:125528005 | P>L | A:124 | (10.99, 35.54, 108.98) | |
| 8:125528006 | P>S | A:124 | (10.99, 35.54, 108.98) | |
| 8:125528003 | K>E | A:125 | (12.13, 39.35, 104.85) | |
| 8:125528000 | D>Y | A:126 | (13.44, 39.98, 110.03) | |
| 8:125527996 | rs200180128 | T>I | A:127 | (15.30, 36.35, 110.85) |
| 8:125520915 | Q>R | A:135 | (26.33, 32.64, 108.67) | |
| 8:125520912 | F>S | A:136 | (29.48, 36.71, 105.84) | |
| 8:125520892 | rs145972678 | K>E | A:143 | (39.63, 32.34, 106.15) |
| 8:125520887 | L>F | A:144 | (35.91, 28.15, 104.63) | |
| 8:125520888 | L>S | A:144 | (35.91, 28.15, 104.63) | |
| 8:125520874 | rs561878237 | H>Y | A:149 | (19.59, 29.61, 98.94) |
| 8:125520867 | COSM258145 | R>Q | A:151 | (15.67, 30.76, 94.98) |
| 8:125520862 | rs542094890 | S>T | A:153 | (16.41, 37.54, 97.13) |
| 8:125520855 | A>V | A:155 | (18.61, 42.77, 96.23) | |
| 8:125520753 | I>V | A:160 | (24.21, 40.95, 102.58) | |
| 8:125520740 | N>S | A:164 | (29.91, 41.32, 103.99) | |
| 8:125520741 | rs199778327 | N>D | A:164 | (29.91, 41.32, 103.99) |
| 8:125520731 | R>Q | A:167 | (33.06, 39.37, 106.73) | |
| 8:125520732 | rs148032742 | R>W | A:167 | (33.06, 39.37, 106.73) |
| 8:125516588 | rs369523223 | V>M | A:173 | (25.36, 31.36, 93.86) |
| 8:125516569 | T>I | A:179 | (18.48, 37.61, 86.09) | |
| 8:125516563 | E>G | A:181 | (20.70, 41.50, 84.73) | |
| 8:125516561 | A>T | A:182 | (22.12, 38.83, 88.64) | |
| 8:125516549 | L>V | A:186 | (26.79, 37.55, 91.58) | |
| 8:125516530 | Y>C | A:192 | (32.96, 30.98, 90.93) | |
| 8:125516526 | I>M | A:193 | (27.17, 30.84, 89.00) | |
| 8:125516519 | rs558323685 | N>H | A:196 | (20.85, 22.41, 89.58) |
| 8:125507767 | A>T | A:204 | (15.30, 32.05, 80.60) | |
| 8:125507743 | I>V | A:212 | (27.62, 32.72, 82.59) | |
| 8:125507731 | K>Q | A:216 | (33.13, 32.40, 87.20) | |
| 8:125507728 | L>I | A:217 | (30.13, 27.77, 85.48) | |
| 8:125506175 | rs556870794 | S>R | A:230 | (9.56, 16.74, 80.12) |
| 8:125506170 | H>R | A:232 | (12.11, 20.83, 83.09) | |
| 8:125506167 | rs568383105 | A>G | A:233 | (13.76, 23.48, 78.62) |
| 8:125506168 | rs138955351 | A>T | A:233 | (13.76, 23.48, 78.62) |
| 8:125506141 | F>I | A:242 | (21.19, 6.25, 84.14) | |
| 8:125506134 | T>I | A:244 | (14.63, 3.33, 85.68) | |
| 8:125506119 | E>G | A:249 | (14.15, -3.54, 90.34) | |
| 8:125506120 | E>Q | A:249 | (14.15, -3.54, 90.34) | |
| 8:125506111 | rs10481074 | H>Y | A:252 | (17.40, -0.96, 88.05) |
| 8:125506107 | C>Y | A:253 | (17.28, 3.96, 89.09) | |
| 8:125500936 | rs141560155 | Q>E | A:265 | (21.18, 14.03, 82.74) |
| 8:125500926 | E>G | A:268 | (24.37, 15.89, 78.40) | |
| 8:125500927 | E>Q | A:268 | (24.37, 15.89, 78.40) | |
| 8:125500904 | D>E | A:275 | (27.79, 25.04, 71.00) | |
| 8:125500905 | D>G | A:275 | (27.79, 25.04, 71.00) | |
| 8:125500898 | rs375358832 | D>E | A:277 | (33.04, 19.65, 74.10) |
| 8:125500881 | rs202120505 | N>S | A:283 | (37.44, 19.30, 82.19) |
| 8:125500882 | N>H | A:283 | (37.44, 19.30, 82.19) | |
| 8:125500878 | T>I | A:284 | (36.10, 24.06, 83.05) | |
| 8:125500872 | rs200212435 COSM129608 |
Y>C | A:286 | (37.24, 18.77, 88.59) |
| 8:125500873 | rs139097928 | Y>H | A:286 | (37.24, 18.77, 88.59) |
| 8:125500866 | N>S | A:288 | (36.13, 26.22, 88.15) | |
| 8:125500851 | rs369341160 | F>S | A:293 | (34.90, 24.79, 97.23) |