General Structure Information
| PDB ID | 2ypd |
| HGNC Gene Label(s) | JMJD1C |
| Structure Name | crystal structure of the jumonji domain of human jumonji domain containing 1c protein |
| Resolution | 2.1Å |
| Reference | AUTH M.VOLLMAR,C.JOHANSSON,T.KROJER,C.STRAIN-DAMERELL,S.FROESE,AUTH 2 E.WILLIAMS,D.COUTANDIN,F.VON DELFT,J.WEIGELT,C.H.ARROWSMITH,AUTH 3 C.BOUNTRA,A.EDWARDS,U.OPPERMANNTITL CRYSTAL STRUCTURE OF THE JUMONJI DOMAIN OF HUMAN JUMONJITITL 2 DOMAIN CONTAINING 1C PROTEINREF TO BE PUBLISHEDREFN |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 326 |
| Number Of SNVs | 45 |
| Number Of Permutations | 15605 |
| Optimal Distance Threshold | 8.0 |
| K Statistic | 0.024 |
| p-value | 0.96 |
COSMIC
| Number Of Residues | 326 |
| Number Of SNVs | 4 |
| Number Of Permutations | 89 |
| Optimal Distance Threshold | 19.0 |
| K Statistic | 0.167 |
| p-value | 1.0 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 45 |
| Number Of COSMIC SNVs | 4 |
| Optimal Distance Threshold | 25.0 |
| K Statistic | -0.373 |
| p-value | 0.276 |
Pathogenic Proximity Analysis
COSMIC PathProx Analysis
