General Structure Information
| PDB ID | 1vca |
| HGNC Gene Label(s) | VCAM1 |
| Structure Name | crystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 angstroms resolution |
| Resolution | 1.8Å |
| Reference | AUTH E.Y.JONES,K.HARLOS,M.J.BOTTOMLEY,R.C.ROBINSON,AUTH 2 P.C.DRISCOLL,R.M.EDWARDS,J.M.CLEMENTS,T.J.DUDGEON,AUTH 3 D.I.STUARTTITL CRYSTAL STRUCTURE OF AN INTEGRIN-BINDING FRAGMENTTITL 2 OF VASCULAR CELL ADHESION MOLECULE-1 AT 1.8 ATITL 3 RESOLUTION.REF NATURE V. 373 539 1995REFN ISSN 0028-0836PMID 7531291DOI 10.1038/373539A0 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 199 |
| Number Of SNVs | 39 |
| Number Of Permutations | 13002 |
| Optimal Distance Threshold | 28.0 |
| K Statistic | 0.596 |
| p-value | 0.285 |
COSMIC
| Number Of Residues | 199 |
| Number Of SNVs | 3 |
| Number Of Permutations | 65 |
| Optimal Distance Threshold | 5.0 |
| K Statistic | 0.333 |
| p-value | 0.061 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 39 |
| Number Of COSMIC SNVs | 3 |
| Optimal Distance Threshold | 5.0 |
| K Statistic | 0.328 |
| p-value | 0.206 |