3LPO.A | SI

General Structure Information

PDB ID 3lpo
HGNC Gene Label(s) SI
Structure Name crystal structure of the n-terminal domain of sucrase-isomaltase
Resolution 3.2Å
Reference AUTH L.SIM,C.WILLEMSMA,S.MOHAN,H.Y.NAIM,B.M.PINTO,D.R.ROSETITL STRUCTURAL BASIS FOR SUBSTRATE SELECTIVITY IN HUMANTITL 2 MALTASE-GLUCOAMYLASE AND SUCRASE-ISOMALTASE N-TERMINALTITL 3 DOMAINS.REF J.BIOL.CHEM. V. 285 17763 2010REFN ISSN 0021-9258PMID 20356844DOI 10.1074/JBC.M109.078980

Variant Set Distributions

ExAC Variants

Number Of Residues 870
Number Of SNVs 247
Number Of Permutations 84027
Optimal Distance Threshold 9.0
K Statistic 0.015
p-value 0.125
ClinVar

Number Of Residues 870
Number Of SNVs 4
Number Of Permutations 1117
Optimal Distance Threshold 20.0
K Statistic 0.0
p-value 0.602
COSMIC

Number Of Residues 870
Number Of SNVs 21
Number Of Permutations 26334
Optimal Distance Threshold 21.0
K Statistic 0.133
p-value 0.775

Ripley’s K Analysis Plots

ExACClinVarCOSMIC

Variant Set Comparisons

ClinVar vs. ExAC

Number Of ExAC SNVs 247
Number Of ClinVar SNVs 4
Optimal Distance Threshold 20.0
K Statistic -0.133
p-value 0.641
Cosmic vs. ExAC

Number Of ExAC SNVs 247
Number Of COSMIC SNVs 22
Optimal Distance Threshold 11.0
K Statistic -0.007
p-value 0.966

Pathogenic Proximity Analysis

ClinVar PathProx Analysis
COSMIC PathProx Analysis

Mapped Variants

[+] ExAC Missense Variants

[+] ClinVar Missense Variants

[+] COSMIC Missense Variants