3GHG.E | FGB

General Structure Information

PDB ID 3ghg
HGNC Gene Label(s) FGB
Structure Name crystal structure of human fibrinogen
Resolution 2.9Å
Reference AUTH J.M.KOLLMAN,L.PANDI,M.R.SAWAYA,M.RILEY,R.F.DOOLITTLETITL CRYSTAL STRUCTURE OF HUMAN FIBRINOGEN.REF BIOCHEMISTRY V. 48 3877 2009REFN ISSN 0006-2960PMID 19296670DOI 10.1021/BI802205G

Variant Set Distributions

ExAC Variants

Number Of Residues 401
Number Of SNVs 105
Number Of Permutations 95820
Optimal Distance Threshold 7.0
K Statistic 0.02
p-value 0.473
ClinVar

Number Of Residues 401
Number Of SNVs 7
Number Of Permutations 14883
Optimal Distance Threshold 12.0
K Statistic 0.0
p-value 0.911
COSMIC

Number Of Residues 401
Number Of SNVs 11
Number Of Permutations 28382
Optimal Distance Threshold 16.0
K Statistic 0.2
p-value 0.599

Ripley’s K Analysis Plots

ExACClinVarCOSMIC

Variant Set Comparisons

ClinVar vs. ExAC

Number Of ExAC SNVs 105
Number Of ClinVar SNVs 7
Optimal Distance Threshold 12.0
K Statistic -0.06
p-value 0.948
Cosmic vs. ExAC

Number Of ExAC SNVs 105
Number Of COSMIC SNVs 10
Optimal Distance Threshold 16.0
K Statistic 0.102
p-value 0.679

Pathogenic Proximity Analysis

ClinVar PathProx Analysis
COSMIC PathProx Analysis

Mapped Variants

[+] ExAC Missense Variants

[+] ClinVar Missense Variants

[+] COSMIC Missense Variants