General Structure Information
| PDB ID | 1ryu |
| HGNC Gene Label(s) | ARID1A |
| Structure Name | solution structure of the swi1 arid |
| Resolution | -1.0Å |
| Reference | AUTH S.KIM,Z.ZHANG,S.UPCHURCH,N.ISERN,Y.CHENTITL STRUCTURE AND DNA-BINDING SITES OF THE SWI1TITL 2 AT-RICH INTERACTION DOMAIN (ARID) SUGGESTTITL 3 DETERMINANTS FOR SEQUENCE-SPECIFIC DNA RECOGNITION.REF J.BIOL.CHEM. V. 279 16670 2004REFN ISSN 0021-9258PMID 14722072DOI 10.1074/JBC.M312115200 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 120 |
| Number Of SNVs | 14 |
| Number Of Permutations | 5320 |
| Optimal Distance Threshold | 14.0 |
| K Statistic | 0.165 |
| p-value | 0.503 |
COSMIC
| Number Of Residues | 120 |
| Number Of SNVs | 4 |
| Number Of Permutations | 1 |
| Optimal Distance Threshold | 13.0 |
| K Statistic | 0.167 |
| p-value | 1.0 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 14 |
| Number Of COSMIC SNVs | 4 |
| Optimal Distance Threshold | 11.0 |
| K Statistic | -0.154 |
| p-value | 0.837 |
Pathogenic Proximity Analysis
COSMIC PathProx Analysis
