4MY2.A | NDP

General Structure Information

PDB ID 4my2
HGNC Gene Label(s) NDP
Structure Name crystal structure of norrin in fusion with maltose binding protein
Resolution 2.4Å
Reference AUTH J.KE,K.G.HARIKUMAR,C.ERICE,C.CHEN,X.GU,L.WANG,N.PARKER,AUTH 2 Z.CHENG,W.XU,B.O.WILLIAMS,K.MELCHER,L.J.MILLER,H.E.XUTITL STRUCTURE AND FUNCTION OF NORRIN IN ASSEMBLY AND ACTIVATIONTITL 2 OF A FRIZZLED 4-LRP5/6 COMPLEX.REF GENES DEV. V. 27 2305 2013REFN ISSN 0890-9369PMID 24186977DOI 10.1101/GAD.228544.113

Variant Set Distributions

ExAC Variants

Number Of Residues 104
Number Of SNVs 10
Number Of Permutations 1980
Optimal Distance Threshold 19.0
K Statistic 0.222
p-value 0.415
ClinVar

Number Of Residues 104
Number Of SNVs 15
Number Of Permutations 2861
Optimal Distance Threshold 17.0
K Statistic 0.457
p-value 0.114

Ripley’s K Analysis Plots

ExACClinVar

Variant Set Comparisons

ClinVar vs. ExAC

Number Of ExAC SNVs 10
Number Of ClinVar SNVs 15
Optimal Distance Threshold 16.0
K Statistic 0.2
p-value 0.282

Pathogenic Proximity Analysis

ClinVar PathProx Analysis

Mapped Variants

[+] ExAC Missense Variants

[+] ClinVar Missense Variants