General Structure Information
| PDB ID | 3d34 |
| HGNC Gene Label(s) | SPON2 |
| Structure Name | structure of the f-spondin domain of mindin |
| Resolution | 1.8Å |
| Reference | AUTH Y.LI,C.CAO,W.JIA,L.YU,M.MO,Q.WANG,Y.HUANG,J.M.LIM,AUTH 2 M.ISHIHARA,L.WELLS,P.AZADI,H.ROBINSON,Y.W.HE,AUTH 3 L.ZHANG,R.A.MARIUZZATITL STRUCTURE OF THE F-SPONDIN DOMAIN OF MINDIN, ANTITL 2 INTEGRIN LIGAND AND PATTERN RECOGNITION MOLECULE.REF EMBO J. V. 28 286 2009REFN ISSN 0261-4189PMID 19153605DOI 10.1038/EMBOJ.2008.288 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 215 |
| Number Of SNVs | 61 |
| Number Of Permutations | 9943 |
| Optimal Distance Threshold | 7.0 |
| K Statistic | 0.041 |
| p-value | 0.624 |
COSMIC
| Number Of Residues | 215 |
| Number Of SNVs | 4 |
| Number Of Permutations | 44 |
| Optimal Distance Threshold | 16.0 |
| K Statistic | 0.167 |
| p-value | 1.0 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 61 |
| Number Of COSMIC SNVs | 4 |
| Optimal Distance Threshold | 21.0 |
| K Statistic | 0.243 |
| p-value | 0.792 |
Pathogenic Proximity Analysis
COSMIC PathProx Analysis
