General Structure Information
| PDB ID | 2ycu |
| HGNC Gene Label(s) | MYH14 |
| Structure Name | crystal structure of human non muscle myosin 2c in pre-power stroke state |
| Resolution | 2.25Å |
| Reference | AUTH K.CHINTHALAPUDI,S.M.HEISSLER,D.J.MANSTEINTITL CRYSTAL STRUCTURE OF HUMAN NON MUSCLE MYOSIN 2C INTITL 2 PRE-POWER STROKE STATEREF TO BE PUBLISHEDREFN |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 737 |
| Number Of SNVs | 163 |
| Number Of Permutations | 50980 |
| Optimal Distance Threshold | 34.0 |
| K Statistic | 0.394 |
| p-value | 0.057 |
ClinVar
| Number Of Residues | 737 |
| Number Of SNVs | 3 |
| Number Of Permutations | 402 |
| Optimal Distance Threshold | 12.0 |
| K Statistic | 0.333 |
| p-value | 0.458 |
COSMIC
| Number Of Residues | 737 |
| Number Of SNVs | 6 |
| Number Of Permutations | 984 |
| Optimal Distance Threshold | 23.0 |
| K Statistic | 0.067 |
| p-value | 0.583 |
Ripley’s K Analysis Plots
ExACClinVarCOSMIC



Variant Set Comparisons
ClinVar vs. ExAC
| Number Of ExAC SNVs | 163 |
| Number Of ClinVar SNVs | 3 |
| Optimal Distance Threshold | 12.0 |
| K Statistic | 0.296 |
| p-value | 0.383 |
Cosmic vs. ExAC
| Number Of ExAC SNVs | 163 |
| Number Of COSMIC SNVs | 8 |
| Optimal Distance Threshold | 21.0 |
| K Statistic | -0.111 |
| p-value | 0.83 |
Mapped Variants
[+] ExAC Missense Variants
| Position | Variant | AA Change | PDB Chain Position | Structure Coordinates |
|---|---|---|---|---|
| 19:50713779 | R>W | A:8 | (-14.30, -29.65, -16.69) | |
| 19:50713780 | R>Q | A:8 | (-14.30, -29.65, -16.69) | |
| 19:50713833 | COSM1395395 COSM1395394 |
R>W | A:26 | (-23.92, -24.13, -21.45) |
| 19:50713845 | COSM1395397 COSM1395396 |
E>K | A:30 | (-23.70, -26.09, -38.01) |
| 19:50713852 | E>A | A:32 | (-24.79, -19.83, -32.03) | |
| 19:50713855 | A>V | A:33 | (-22.09, -21.46, -29.38) | |
| 19:50713884 | rs368576196 | R>W | A:43 | (-24.30, -17.46, -19.08) |
| 19:50713885 | rs185910660 | R>Q | A:43 | (-24.30, -17.46, -19.08) |
| 19:50713900 | R>L | A:48 | (-18.61, -24.08, -34.26) | |
| 19:50713915 | rs370947453 COSM1216179 COSM1216178 |
R>P | A:53 | (-10.34, -29.14, -29.64) |
| 19:50713929 | K>E | A:58 | (-1.43, -35.49, -20.68) | |
| 19:50713944 | rs374397467 | E>K | A:63 | (9.69, -30.10, -23.01) |
| 19:50713995 | L>F | A:80 | (4.61, -20.62, -24.52) | |
| 19:50714013 | S>P | A:86 | (7.44, -21.79, -14.46) | |
| 19:50714016 | rs199910006 | G>S | A:87 | (10.85, -20.28, -15.75) |
| 19:50720881 | G>S | A:94 | (9.90, -28.79, -33.59) | |
| 19:50720885 | L>P | A:95 | (12.77, -28.93, -36.58) | |
| 19:50720894 | V>A | A:98 | (10.75, -20.65, -28.79) | |
| 19:50720899 | I>V | A:100 | (9.88, -15.95, -23.95) | |
| 19:50720930 | rs372189033 | T>I | A:110 | (25.60, -22.82, -14.65) |
| 19:50720939 | I>T | A:113 | (23.36, -26.37, -16.58) | |
| 19:50720941 | V>M | A:114 | (27.10, -26.66, -19.61) | |
| 19:50720949 | rs34773557 | M>I | A:116 | (22.90, -31.40, -18.21) |
| 19:50720953 | rs373470153 | R>W | A:118 | (29.58, -32.11, -22.56) |
| 19:50720954 | rs558956312 | R>Q | A:118 | (29.58, -32.11, -22.56) |
| 19:50720956 | G>S | A:119 | (25.83, -35.80, -25.20) | |
| 19:50720966 | COSM1734917 COSM1734916 COSM4080294 |
R>H | A:122 | (15.53, -31.51, -29.08) |
| 19:50720971 | E>K | A:124 | (17.97, -37.19, -23.64) | |
| 19:50720980 | P>S | A:127 | (14.02, -27.15, -23.34) | |
| 19:50720986 | rs373197435 COSM4080297 COSM4080295 COSM4080296 |
V>M | A:129 | (20.60, -22.44, -25.94) |
| 19:50721013 | R>W | A:138 | (27.70, -33.70, -31.29) | |
| 19:50721014 | R>Q | A:138 | (27.70, -33.70, -31.29) | |
| 19:50721026 | rs199583971 | Q>R | A:142 | (27.61, -36.77, -36.79) |
| 19:50726342 | rs200818171 | R>C | A:144 | (32.63, -32.96, -41.36) |
| 19:50726343 | R>H | A:144 | (32.63, -32.96, -41.36) | |
| 19:50726357 | I>L | A:149 | (22.85, -20.88, -34.73) | |
| 19:50726367 | T>I | A:152 | (14.71, -14.48, -34.77) | |
| 19:50726517 | COSM4127798 COSM4127796 COSM4127797 |
A>S | A:157 | (14.01, -10.41, -27.79) |
| 19:50726559 | A>T | A:171 | (34.16, -22.53, -25.33) | |
| 19:50726565 | V>M | A:173 | (32.41, -28.17, -24.96) | |
| 19:50726572 | S>L | A:175 | (38.58, -26.77, -25.99) | |
| 19:50726583 | rs200969825 | G>S | A:179 | (45.45, -25.22, -23.29) |
| 19:50726596 | P>L | A:183 | (42.88, -22.73, -16.37) | |
| 19:50728851 | rs200598771 | E>Q | A:190 | (38.09, -19.99, -23.61) |
| 19:50728854 | rs371766484 | R>W | A:191 | (41.36, -16.03, -21.66) |
| 19:50728855 | R>Q | A:191 | (41.36, -16.03, -21.66) | |
| 19:50728881 | L>I | A:200 | (31.93, -5.38, -30.51) | |
| 19:50728930 | rs371293576 | R>Q | A:216 | (22.00, 0.04, -33.31) |
| 19:50730168 | rs568322917 | F>L | A:220 | (28.13, -14.71, -39.58) |
| 19:50730169 | rs200424400 | I>V | A:221 | (30.26, -15.08, -35.22) |
| 19:50730172 | R>C | A:222 | (32.78, -17.97, -40.13) | |
| 19:50730173 | R>H | A:222 | (32.78, -17.97, -40.13) | |
| 19:50730175 | rs55645295 | I>V | A:223 | (33.08, -20.71, -34.52) |
| 19:50730179 | N>S | A:224 | (36.70, -21.80, -37.30) | |
| 19:50730187 | rs202246093 | V>I | A:227 | (39.21, -32.89, -38.00) |
| 19:50730199 | I>V | A:231 | (37.59, -24.13, -31.18) | |
| 19:50730200 | I>T | A:231 | (37.59, -24.13, -31.18) | |
| 19:50730202 | V>M | A:232 | (41.01, -23.39, -34.43) | |
| 19:50730208 | COSM382846 COSM382845 |
A>T | A:234 | (37.25, -16.79, -35.01) |
| 19:50730215 | I>T | A:236 | (34.00, -11.06, -36.28) | |
| 19:50733812 | Q>R | A:249 | (21.22, 10.90, -29.70) | |
| 19:50733857 | G>A | A:264 | (32.77, 8.71, -16.30) | |
| 19:50733874 | L>F | A:270 | (42.69, 9.74, -19.36) | |
| 19:50735189 | D>N | A:273 | (46.27, 13.07, -21.46) | |
| 19:50735201 | rs367826402 | E>K | A:277 | (35.15, 18.45, -22.08) |
| 19:50735210 | rs201637434 | S>P | A:280 | (27.26, 19.09, -20.76) |
| 19:50735213 | H>Y | A:281 | (30.66, 20.80, -21.87) | |
| 19:50735214 | H>R | A:281 | (30.66, 20.80, -21.87) | |
| 19:50735235 | G>V | A:288 | (23.71, 14.86, -21.60) | |
| 19:50735237 | rs34498817 | P>A | A:289 | (23.18, 13.22, -19.00) |
| 19:50735238 | P>L | A:289 | (23.18, 13.22, -19.00) | |
| 19:50735247 | rs35315400 | S>C | A:292 | (23.11, 5.51, -14.33) |
| 19:50735252 | G>S | A:294 | (29.07, 5.71, -11.55) | |
| 19:50735256 | rs573739001 | Q>R | A:295 | (27.17, 2.48, -13.63) |
| 19:50735261 | rs375565162 | R>W | A:297 | (34.59, 4.81, -12.28) |
| 19:50735262 | rs373908919 | R>Q | A:297 | (34.59, 4.81, -12.28) |
| 19:50735280 | rs151082668 | T>M | A:303 | (36.06, -2.23, -21.52) |
| 19:50735283 | L>P | A:304 | (40.13, -1.15, -20.25) | |
| 19:50735289 | S>L | A:306 | (38.49, -6.89, -22.34) | |
| 19:50735295 | rs139215122 | R>Q | A:308 | (44.08, -4.88, -20.72) |
| 19:50735315 | E>K | A:315 | (50.39, 2.12, -27.04) | |
| 19:50735317 | E>D | A:315 | (50.39, 2.12, -27.04) | |
| 19:50735320 | E>D | A:316 | (46.54, -0.46, -29.65) | |
| 19:50747507 | R>W | A:322 | (43.87, 9.73, -28.82) | |
| 19:50747508 | R>Q | A:322 | (43.87, 9.73, -28.82) | |
| 19:50747512 | M>I | A:323 | (39.67, 8.44, -32.27) | |
| 19:50747517 | rs150806988 | S>L | A:325 | (37.52, 12.44, -27.98) |
| 19:50747534 | rs119103280 | G>C | A:331 | (30.92, 19.15, -32.22) |
| 19:50747543 | A>T | A:334 | (31.38, 26.89, -33.76) | |
| 19:50747544 | rs201762439 | A>V | A:334 | (31.38, 26.89, -33.76) |
| 19:50747552 | R>G | A:337 | (26.02, 33.28, -41.90) | |
| 19:50747558 | R>W | A:339 | (29.24, 41.52, -41.74) | |
| 19:50747567 | D>N | A:342 | (26.99, 32.57, -46.62) | |
| 19:50747569 | D>E | A:342 | (26.99, 32.57, -46.62) | |
| 19:50747582 | rs532887367 | P>A | A:347 | (34.72, 32.51, -34.64) |
| 19:50747589 | rs537153044 | N>S | A:349 | (40.25, 28.49, -32.84) |
| 19:50750267 | rs552730148 | Q>R | A:353 | (43.27, 24.45, -31.23) |
| 19:50750278 | R>C | A:357 | (46.08, 18.71, -29.59) | |
| 19:50750279 | rs374720181 COSM1216170 COSM1216169 |
R>H | A:357 | (46.08, 18.71, -29.59) |
| 19:50750294 | rs368472938 | G>E | A:362 | (46.66, 21.21, -38.77) |
| 19:50750300 | T>M | A:364 | (45.62, 26.19, -40.94) | |
| 19:50750345 | R>Q | A:379 | (45.23, 19.95, -67.34) | |
| 19:50750368 | T>A | A:387 | (27.59, 27.30, -46.28) | |
| 19:50752244 | rs371046797 | A>S | A:391 | (30.30, 22.83, -42.77) |
| 19:50752248 | rs375383776 | D>G | A:392 | (27.76, 22.29, -39.84) |
| 19:50752253 | A>T | A:394 | (31.11, 17.95, -43.03) | |
| 19:50752262 | A>T | A:397 | (30.49, 13.22, -41.93) | |
| 19:50752263 | A>V | A:397 | (30.49, 13.22, -41.93) | |
| 19:50752283 | E>K | A:404 | (32.38, 3.76, -40.12) | |
| 19:50752286 | rs376322446 | R>C | A:405 | (37.18, 4.65, -41.53) |
| 19:50752295 | R>C | A:408 | (35.79, -0.93, -40.83) | |
| 19:50752298 | rs572234218 | W>G | A:409 | (41.62, -0.80, -35.57) |
| 19:50752310 | COSM4080313 COSM4080311 COSM4080312 |
R>C | A:413 | (43.58, -6.02, -33.60) |
| 19:50752311 | R>H | A:413 | (43.58, -6.02, -33.60) | |
| 19:50752319 | R>W | A:416 | (45.50, -9.19, -36.55) | |
| 19:50752331 | rs368089608 | R>C | A:420 | (44.22, -18.21, -33.76) |
| 19:50752332 | rs199812021 | R>H | A:420 | (44.22, -18.21, -33.76) |
| 19:50752341 | rs375694189 | R>H | A:423 | (44.43, -25.94, -38.04) |
| 19:50752347 | G>D | A:425 | (38.22, -28.71, -40.90) | |
| 19:50752356 | F>Y | A:428 | (31.43, -22.73, -40.62) | |
| 19:50752377 | COSM3835425 COSM3835423 COSM3835424 |
A>V | A:435 | (19.39, -5.77, -35.84) |
| 19:50752976 | rs371254858 | M>V | A:465 | (10.71, -24.79, -42.44) |
| 19:50752982 | V>M | A:467 | (10.23, -24.33, -50.04) | |
| 19:50752988 | E>K | A:469 | (11.05, -30.18, -46.22) | |
| 19:50753005 | rs375667114 | Q>H | A:474 | (9.82, -33.42, -56.20) |
| 19:50753006 | COSM1481360 COSM1481359 |
R>C | A:475 | (14.95, -33.30, -55.02) |
| 19:50753007 | R>H | A:475 | (14.95, -33.30, -55.02) | |
| 19:50753012 | G>S | A:477 | (9.30, -39.25, -54.92) | |
| 19:50753031 | L>R | A:483 | (1.25, -27.86, -48.21) | |
| 19:50753042 | COSM475069 COSM475068 |
L>F | A:487 | (4.47, -18.05, -44.88) |
| 19:50753055 | rs371300947 | P>L | A:491 | (6.18, -9.22, -52.13) |
| 19:50753063 | D>N | A:494 | (10.53, -6.95, -55.06) | |
| 19:50753066 | L>F | A:495 | (9.06, -2.82, -52.60) | |
| 19:50753777 | COSM1395409 COSM1395408 |
N>K | A:501 | (11.36, -4.21, -63.60) |
| 19:50753839 | S>L | A:522 | (12.07, 14.41, -55.31) | |
| 19:50753880 | K>Q | A:536 | (3.11, -4.77, -49.18) | |
| 19:50753889 | rs545603705 | R>W | A:539 | (0.13, 6.57, -51.88) |
| 19:50753904 | rs200843734 COSM192093 COSM192094 |
R>W | A:544 | (-5.32, 10.93, -41.84) |
| 19:50753925 | V>I | A:551 | (6.53, -0.51, -45.62) | |
| 19:50753937 | rs576014205 | A>T | A:555 | (5.99, -7.22, -38.48) |
| 19:50753938 | COSM4080316 COSM4080314 COSM4080315 |
A>V | A:555 | (5.99, -7.22, -38.48) |
| 19:50755899 | rs571071269 | D>N | A:559 | (5.29, 5.07, -40.76) |
| 19:50755912 | N>S | A:563 | (14.20, 13.90, -43.71) | |
| 19:50755923 | rs200231790 | M>V | A:567 | (23.16, 12.81, -48.28) |
| 19:50755933 | COSM1395411 COSM1395410 |
M>T | A:570 | (25.62, 9.88, -51.73) |
| 19:50755950 | N>D | A:576 | (40.28, 18.48, -48.86) | |
| 19:50755951 | rs556139921 | N>S | A:576 | (40.28, 18.48, -48.86) |
| 19:50755953 | rs568160869 | V>I | A:577 | (39.55, 16.75, -44.28) |
| 19:50755956 | rs201827463 | A>T | A:578 | (40.49, 13.03, -45.88) |
| 19:50755970 | H>Q | A:582 | (45.92, 9.26, -45.89) | |
| 19:50755990 | T>M | A:589 | (44.24, 8.74, -37.50) | |
| 19:50760567 | V>M | A:600 | (33.96, 13.87, -53.94) | |
| 19:50760622 | R>H | A:618 | (27.33, 7.65, -67.55) | |
| 19:50760625 | R>Q | A:619 | (23.22, 9.15, -63.48) | |
| 19:50760634 | F>S | A:622 | (31.24, 6.72, -56.76) | |
| 19:50760635 | COSM3537111 COSM3537109 COSM3537110 |
F>L | A:622 | (31.24, 6.72, -56.76) |
| 19:50760637 | R>Q | A:623 | (29.35, 0.09, -55.15) | |
| 19:50760657 | K>Q | A:630 | (21.46, -4.91, -51.92) | |
| 19:50760672 | rs373929652 COSM3743057 COSM3743055 COSM3743056 |
R>C | A:635 | (28.58, -10.82, -49.69) |
| 19:50760693 | N>H | A:642 | (26.33, -23.26, -48.34) | |
| 19:50760701 | N>K | A:644 | (22.13, -27.07, -41.26) | |
| 19:50760705 | S>R | A:646 | (19.30, -23.74, -36.19) | |
| 19:50760720 | rs201317527 | I>V | A:651 | (9.58, -13.90, -28.18) |
| 19:50760730 | rs555236417 | N>T | A:654 | (6.86, -6.81, -22.18) |
| 19:50762416 | rs552485033 | P>A | A:664 | (-1.24, -11.64, -24.26) |
| 19:50762420 | R>Q | A:665 | (-2.92, -9.66, -28.64) | |
| 19:50762494 | R>C | A:690 | (15.71, -36.23, -44.07) | |
| 19:50762497 | I>L | A:691 | (17.96, -42.54, -43.00) | |
| 19:50762509 | E>K | A:695 | (22.47, -44.70, -41.82) | |
| 19:50762515 | COSM999620 COSM999619 |
R>W | A:697 | (21.90, -53.14, -44.06) |
| 19:50763907 | rs397516628 | E>K | A:701 | (20.82, -55.63, -40.01) |
| 19:50763923 | rs562423876 | N>S | A:706 | (16.21, -63.32, -40.34) |
| 19:50763926 | A>G | A:707 | (15.28, -59.87, -43.52) | |
| 19:50763929 | I>N | A:708 | (18.48, -58.90, -45.64) | |
| 19:50763930 | I>M | A:708 | (18.48, -58.90, -45.64) | |
| 19:50763934 | K>E | A:710 | (23.31, -63.52, -45.78) | |
| 19:50763936 | K>N | A:710 | (23.31, -63.52, -45.78) | |
| 19:50763938 | G>D | A:711 | (22.28, -61.36, -50.15) | |
| 19:50763956 | Q>R | A:717 | (15.59, -52.55, -48.47) | |
| 19:50763972 | M>I | A:722 | (9.51, -55.12, -36.32) | |
| 19:50764739 | rs201337011 | A>V | A:725 | (3.09, -47.83, -41.32) |
| 19:50764747 | L>V | A:728 | (7.14, -44.91, -43.98) | |
| 19:50764765 | R>C | A:734 | (13.30, -43.51, -43.84) | |
| 19:50764766 | rs370765705 COSM1190120 COSM1190119 |
R>H | A:734 | (13.30, -43.51, -43.84) |
| 19:50764768 | V>M | A:735 | (11.34, -39.90, -45.47) | |
| 19:50764777 | S>G | A:738 | (9.35, -39.81, -35.49) | |
| 19:50764778 | S>T | A:738 | (9.35, -39.81, -35.49) | |
| 19:50764793 | COSM174013 COSM174014 |
R>Q | A:743 | (18.53, -45.54, -32.13) |
| 19:50764824 | rs199992699 | E>D | A:753 | (23.28, -59.83, -27.78) |
| 19:50764826 | rs370936318 COSM4080325 COSM4080323 COSM4080324 |
R>Q | A:754 | (25.08, -57.70, -23.41) |
[+] ClinVar Missense Variants
| Position | Variant | AA Change | PDB Chain Position | Structure Coordinates |
|---|---|---|---|---|
| 19:50713981 | rs119103281 | S>L | A:75 | (-2.50, -24.32, -27.44) |
| 19:50747534 | rs119103280 | G>C | A:331 | (30.92, 19.15, -32.22) |
| 19:50762467 | rs28940307 | R>S | A:681 | (0.27, -26.52, -38.42) |
[+] COSMIC Missense Variants
| Position | Variant | AA Change | PDB Chain Position | Structure Coordinates |
|---|---|---|---|---|
| 19:50713782 | COSM1216174 | R>C | A:9 | (-18.41, -29.87, -23.15) |
| 19:50720966 | COSM4080294 | R>H | A:122 | (15.53, -31.51, -29.08) |
| 19:50726517 | COSM4127797 | A>S | A:157 | (14.01, -10.41, -27.79) |
| 19:50730187 | COSM4624078 | V>I | A:227 | (39.21, -32.89, -38.00) |
| 19:50730208 | COSM382846 | A>T | A:234 | (37.25, -16.79, -35.01) |
| 19:50750279 | COSM5005026 | R>H | A:357 | (46.08, 18.71, -29.59) |
| 19:50753045 | COSM3378815 | D>N | A:488 | (5.92, -15.46, -49.71) |
| 19:50753916 | COSM3713010 | D>Y | A:548 | (7.13, 10.73, -46.25) |
| 19:50764812 | COSM3971170 | Q>H | A:749 | (17.59, -56.08, -29.18) |