2PLA.B | GPD1L

General Structure Information

PDB ID 2pla
HGNC Gene Label(s) GPD1L
Structure Name crystal structure of human glycerol-3-phosphate dehydrogenase 1-like protein
Resolution 2.51Å
Reference AUTH J.UPPENBERG,C.SMEE,V.HOZJAN,K.KAVANAGH,G.BUNKOCZI,AUTH 2 E.PAPAGRIGORIOU,A.C.W.PIKE,E.UGOCHUKWU,C.UMEANO,F.VON DELFT,AUTH 3 J.WEIGELT,C.H.ARROWSMITH,A.EDWARDS,M.SUNDSTROM,U.OPPERMANNTITL CRYSTAL STRUCTURE OF HUMAN GLYCEROL-3-PHOSPHATETITL 2 DEHYDROGENASE 1-LIKE PROTEIN.REF TO BE PUBLISHEDREFN

Variant Set Distributions

ExAC Variants

Number Of Residues 343
Number Of SNVs 86
Number Of Permutations 36834
Optimal Distance Threshold 12.0
K Statistic 0.089
p-value 0.712
ClinVar

Number Of Residues 343
Number Of SNVs 4
Number Of Permutations 713
Optimal Distance Threshold 11.0
K Statistic 0.167
p-value 0.972

Ripley’s K Analysis Plots

ExACClinVar

Variant Set Comparisons

ClinVar vs. ExAC

Number Of ExAC SNVs 86
Number Of ClinVar SNVs 4
Optimal Distance Threshold 11.0
K Statistic 0.094
p-value 0.902

Mapped Variants

[+] ExAC Missense Variants

[+] ClinVar Missense Variants