General Structure Information
| PDB ID | 2pkd |
| HGNC Gene Label(s) | CD84 |
| Structure Name | crystal structure of cd84: insite into slam family function |
| Resolution | 2.04Å |
| Reference | AUTH Q.YAN,V.N.MALASHKEVICH,A.FEDOROV,E.FEDOROV,E.CAO,AUTH 2 J.W.LARY,J.L.COLE,S.G.NATHENSON,S.C.ALMOTITL STRUCTURE OF CD84 PROVIDES INSIGHT INTO SLAMTITL 2 FAMILY FUNCTION.REF PROC.NATL.ACAD.SCI.USA V. 104 10583 2007REFN ISSN 0027-8424PMID 17563375DOI 10.1073/PNAS.0703893104 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 108 |
| Number Of SNVs | 43 |
| Number Of Permutations | 3868 |
| Optimal Distance Threshold | 11.0 |
| K Statistic | 0.199 |
| p-value | 0.507 |
COSMIC
| Number Of Residues | 108 |
| Number Of SNVs | 3 |
| Number Of Permutations | 18 |
| Optimal Distance Threshold | 13.0 |
| K Statistic | 0.333 |
| p-value | 1.0 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 43 |
| Number Of COSMIC SNVs | 3 |
| Optimal Distance Threshold | 6.0 |
| K Statistic | 0.297 |
| p-value | 0.383 |
Pathogenic Proximity Analysis
COSMIC PathProx Analysis
