General Structure Information
| PDB ID | 2ooq |
| HGNC Gene Label(s) | PTPRT |
| Structure Name | crystal structure of the human receptor phosphatase ptprt |
| Resolution | 1.8Å |
| Reference | AUTH A.J.BARR,E.UGOCHUKWU,W.H.LEE,O.N.KING,P.FILIPPAKOPOULOS,AUTH 2 I.ALFANO,P.SAVITSKY,N.A.BURGESS-BROWN,S.MULLER,S.KNAPPTITL LARGE-SCALE STRUCTURAL ANALYSIS OF THE CLASSICAL HUMANTITL 2 PROTEIN TYROSINE PHOSPHATOME.REF CELL(CAMBRIDGE,MASS.) V. 136 352 2009REFN ISSN 0092-8674PMID 19167335DOI 10.1016/J.CELL.2008.11.038 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 279 |
| Number Of SNVs | 62 |
| Number Of Permutations | 11218 |
| Optimal Distance Threshold | 8.0 |
| K Statistic | 0.026 |
| p-value | 0.204 |
COSMIC
| Number Of Residues | 279 |
| Number Of SNVs | 7 |
| Number Of Permutations | 3209 |
| Optimal Distance Threshold | 12.0 |
| K Statistic | 0.048 |
| p-value | 0.86 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 62 |
| Number Of COSMIC SNVs | 7 |
| Optimal Distance Threshold | 11.0 |
| K Statistic | 0.066 |
| p-value | 0.802 |