1YRK.A | PRKCD

General Structure Information

PDB ID 1yrk
HGNC Gene Label(s) PRKCD
Structure Name the c2 domain of pkc is a new phospho-tyrosine binding domain
Resolution 1.7Å
Reference AUTH C.H.BENES,N.WU,A.E.ELIA,T.DHARIA,L.C.CANTLEY,AUTH 2 S.P.SOLTOFFTITL THE C2 DOMAIN OF PKCDELTA IS A PHOSPHOTYROSINETITL 2 BINDING DOMAIN.REF CELL(CAMBRIDGE,MASS.) V. 121 271 2005REFN ISSN 0092-8674PMID 15851022DOI 10.1016/J.CELL.2005.02.019

Variant Set Distributions

ExAC Variants

Number Of Residues 123
Number Of SNVs 22
Number Of Permutations 11939
Optimal Distance Threshold 17.0
K Statistic 0.463
p-value 0.614
COSMIC

Number Of Residues 123
Number Of SNVs 3
Number Of Permutations 76
Optimal Distance Threshold 6.0
K Statistic 0.333
p-value 0.24

Ripley’s K Analysis Plots

ExACCOSMIC

Variant Set Comparisons

Cosmic vs. ExAC

Number Of ExAC SNVs 22
Number Of COSMIC SNVs 3
Optimal Distance Threshold 8.0
K Statistic 0.273
p-value 0.643

Pathogenic Proximity Analysis

COSMIC PathProx Analysis

Mapped Variants

[+] ExAC Missense Variants

[+] COSMIC Missense Variants