General Structure Information
| PDB ID | 1v83 |
| HGNC Gene Label(s) | B3GAT1 |
| Structure Name | crystal structure of human glcat-p in complex with udp and mn2+ |
| Resolution | 1.9Å |
| Reference | AUTH S.KAKUDA,T.SHIBA,M.ISHIGURO,H.TAGAWA,S.OKA,AUTH 2 Y.KAJIHARA,T.KAWASAKI,S.WAKATSUKI,R.KATOTITL STRUCTURAL BASIS FOR ACCEPTOR SUBSTRATETITL 2 RECOGNITION OF A HUMAN GLUCURONYLTRANSFERASE,TITL 3 GLCAT-P, AN ENZYME CRITICAL IN THE BIOSYNTHESIS OFTITL 4 THE CARBOHYDRATE EPITOPE HNK-1REF J.BIOL.CHEM. V. 279 22693 2004REFN ISSN 0021-9258PMID 14993226DOI 10.1074/JBC.M400622200 |
Variant Set Distributions
ExAC Variants
| Number Of Residues | 240 |
| Number Of SNVs | 44 |
| Number Of Permutations | 9361 |
| Optimal Distance Threshold | 19.0 |
| K Statistic | 0.271 |
| p-value | 0.064 |
COSMIC
| Number Of Residues | 240 |
| Number Of SNVs | 4 |
| Number Of Permutations | 1559 |
| Optimal Distance Threshold | 32.0 |
| K Statistic | 0.5 |
| p-value | 0.485 |
Ripley’s K Analysis Plots
ExACCOSMIC
Variant Set Comparisons
Cosmic vs. ExAC
| Number Of ExAC SNVs | 44 |
| Number Of COSMIC SNVs | 4 |
| Optimal Distance Threshold | 13.0 |
| K Statistic | -0.118 |
| p-value | 0.824 |